多肽组学分析揭示内源性多肽在肺腺癌恶性表型的关键作用
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1.南京医科大学第一附属医院;2.南京医科大学附属无锡人民医院

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国家自然科学基金青年科学基金项目(82003094)


Peptidomic analysis reveals the critical roles of endogenous peptides in the malignant phenotype of lung adenocarcinoma
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Affiliation:

1.the First Affiliated Hospital of Nanjing Medical University;2.Wuxi People'3.'4.s Hospital Affiliated to Nanjing Medical University

Fund Project:

National Natural Science Foundation of China(82003094)

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    摘要:

    目的:通过多肽组学分析研究多肽在肺腺癌发生发展中起到的作用及其潜在分子机制。方法:提取3对年龄匹配的男性肺腺癌癌和癌旁的内源性多肽,通过液相色谱-串联质谱法(LC-MS/MS)筛选差异表达的多肽,借助生物信息学推测差异多肽的潜在功能,再使用CCK-8实验、划痕实验、Transwell实验验证重点多肽对肺腺癌细胞株(A549、H1975)恶性表型的影响。结果:我们共鉴定了10 kDa以下的4538条多肽,共筛选出242条癌和癌旁间存在差异表达的多肽(差异倍数≥2.0, FDR<0.05),对应202个前体蛋白。GO分析以及KEGG通路富集分析的结果显示这些蛋白与肿瘤发生发展的一系列重要生物学活动密切相关。此外我们还聚焦于首次发现的多肽LACRP2,体外实验证实该多肽可以抑制肺腺癌细胞株的增殖、侵袭和迁移。结论:内源性多肽LACRP2可能与肺腺癌的增殖、侵袭和迁移有关。多肽组学可以更全面的帮助了解肺腺癌的发生发展机制。

    Abstract:

    Objective: To study the role of peptides in lung adenocarcinoma and its potential molecular mechanisms through peptideomics analysis. Methods: We extracted and LC-MS/MS detected endogenous peptides from 3 pairs of age-matched male lung adenocarcinoma and paracancerous tissues. Using bioinformatics to infer the potential functions of differential peptides. CCK-8 assays, wound-healing assays, and Transwell assays were carried out to verify the effect of key peptides on the malignant phenotype of lung adenocarcinoma cell lines (A549, H1975). Results: A total of 4538 peptides were identified, of which 242 were differentially expressed (fold change≥2.0, FDR<0.05), corresponding to 202 precursor proteins. GO analysis and KEGG pathway enrichment analysis show that these proteins are closely related to a series of important biological activities of tumorigenesis and development. Additionally, we also focused on the novel peptide LACRP2. In vitro experiments confirmed that this peptide can inhibit the proliferation, invasion and migration of lung adenocarcinoma cell lines. Conclusion: The endogenous peptide LACRP2 may be related to the proliferation, invasion and migration of lung adenocarcinoma. Peptidomics can aid in understanding the pathogenesis of lung cancer more comprehensively.

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  • 收稿日期:2021-11-29
  • 最后修改日期:2022-01-21
  • 录用日期:2022-03-11
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