IGF2BP3 drives the metabolic ⁃ epigenetic crosstalk in triple ⁃ negative breast cancer through m6AEP300 axis⁃mediated lactylation modification
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Breast Disease Center,the First Affiliated Hospital of Nanjing Medical University,Nanjing 210029 ,China

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    Abstract:

    Objective:To investigate the functional impact of lactate on triple - negative breast cancer(TNBC)malignancy and elucidate an m6A-dependent epigenetic mechanism through which insulin-like growth factor 2 mRNA-binding protein 3(IGF2BP3) orchestrates metabolic reprogramming via regulation of EP300. Methods:TNBC cells were treated with exogenous sodium lactate supplementation to investigate their oncogenic effects. Cell proliferation and migration were assessed via CCK -8,colony formation, wound healing,and Transwell assays. Stable IGF2BP3-knockdown cell models were established using shRNA lentiviral vectors,with histone lactylation modification levels analyzed by Western blot. RNA immunoprecipitation sequencing(RIP - seq)and m6A - specific methylated RNA immunoprecipitation sequencing(MeRIP-seq)were used to identify IGF2BP3’s m6A target genes,validated by qRT- PCR and Western blot for key molecule expression. Results:Sodium lactate treatment significantly enhanced TNBC cell proliferation and migration,with pan -lactylation levels increasing dose -dependently. IGF2BP3 knockdown reduced histone lactylation. Integrated RIP - seq/MeRIP - seq analysis identified 699 candidate genes whose transcripts bore both IGF2BP3 - specific binding and m6A modifications,significantly enriched in epigenetic regulation and metabolic pathways. IGF2BP3-binding regions on EP300 transcripts overlapped extensively with m6A sites,and EP300 expression was markedly downregulated post - IGF2BP3 knockdown. Conclusion:Exogenous lactate drives TNBC malignant progression by orchestrating pan - lactylation modifications. IGF2BP3 regulates EP300 expression through m6A - dependent mechanisms,mediating the synergistic interplay between histone lactylation and metabolic reprogramming to drive TNBC progression. These findings provide a theoretical basis for novel therapeutic strategies targeting metabolism-epigenetics crosstalk.

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LI Yihan, WANG Ziwen, CHEN Rui, YANG Haiyan, CAI Mengyuan, LI Yixun, WU Kefei, WANG Yuxin, DING Qiang. IGF2BP3 drives the metabolic ⁃ epigenetic crosstalk in triple ⁃ negative breast cancer through m6AEP300 axis⁃mediated lactylation modification[J].,2025,(7):905-912.

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  • Received:April 21,2025
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  • Online: July 10,2025
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