This paper analyzes the demand of professional education of bio-medical graduate students in China. We explore necessity, feasibility and potential problems to implement the flipped classroom to bio-medical graduate students with the "construction-deconstruction" theory as the guiding ideology. The authors propose that "construction-deconstruction" theory can enlighten "flipped classroom", and that the current "flipped classroom" teaching mode is one of the best practical model for "construction- deconstruction" theory in the field of education, meeting the need of cultivating bio-medical graduate students' innovation and problem-solving abilities. It is especially suitable for curriculum system of bio-medical graduate students.