结直肠癌特征性环状RNA筛选
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江苏省卫生厅面上科研项目(H201313)


Expression profile of circular RNA in colorectal cancer
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    摘要:

    目的:检测环状RNA(circularRNA,circRNA)在结直肠癌组织及对应癌旁组织中的表达谱变化。方法:应用高通量circRNA芯片技术筛选6例人结直肠癌组织及对应癌旁组织中circRNA表达谱差异,经过对原始数据进行预处理-归一化后,筛选出差异表达的circRNA,并对其进行聚类分析。结果:结直肠癌组织与癌旁组织之间存在892种circRNA的差异表达,其中在肿瘤组织中高表达的有412条,低表达的有480条(变化>2倍且P < 0.05)。结论:结直肠癌组织与对应癌旁组织比较,circRNA表达谱发生了显著变化,提示这些差异表达的circRNA可能与结直肠癌的发生发展密切相关。

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    Objective:To analyze the expression profile variation of circular RNA(circRNA) between normal colorectal tissues and colorectal cancer(CRC) tissues. Methods: Human circRNA microarray was performed to detect the difference of circRNA expression between 6 cases of CRC tissues and 6 cases of normal colorectal tissues. After pretreatment and homogenization of raw data,the circRNAs with differental expression were screened out and then analyzed by hierarchical clustering and scatter volcano diagram. Results: Compared with normal colorectal tissues, there were 892 circRNAs differentially expressed which have more than 2 times variation and significant difference(P < 0.05). Among them, 412 increased and change′s fold more than 2 times,while 480 reduced and change′s fold more than 2 times. Conclusion: The circRNA expression profile of CRC changed significantly in comparison with the normal colorectal tissues, the different circRNAs may be associated with the development of CRC.

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邵婧娴,朱利芹,马晶晶,杜 楠,何敬东.结直肠癌特征性环状RNA筛选[J].南京医科大学学报(自然科学版),2015,(11):1542-1546

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  • 收稿日期:2015-06-19
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  • 在线发布日期: 2015-11-30
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