Objective:We investigated whether genetic variants of HNF1A and HNF1B were associated with the risk of breast cancer in a Chinese Han population. Methods:A case-control study of 1 032 breast cancer cases and 1 063 cancer-free female controls was performed,and six single nucleotide polymorphisms(SNPs)in HNF1A and HNF1B were genotyped in Illumina genotyping platform. Logistic regression was used to calculate the odds ratios(ORs)and 95% confidence intervals(CIs)for the association between a single locus and breast cancer risk with adjustment for age,age at menarche,and menopausal status. Results:Multiple logistic regression analysis illustrated that three SNPs within HNF1A gene were associated with significantly decreased risk of breast cancer(rs2464196,OR=0.80,95%CI:0.71~0.91,P=7.45×10-4;rs1183910,OR=0.87,95%CI:0.77~0.99,P=0.039;rs7310409,OR=0.86,95% CI:0.76~0.98,P=0.023). After correction for multiple comparisons(FDR<0.05),rs2464196 was still significantly associated with susceptibility to breast cancer(P=4.47×10-3). Conclusion:The SNP rs2464196 within HNF1A gene may be a candidate marker for susceptibility to breast cancer in Chinese Han population.