多肽组学分析揭示内源性多肽对肺腺癌恶性表型的关键作用
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国家自然科学基金(82003094)


Peptidomic analysis reveals the critical roles of endogenous peptides in the malignant phenotype of lung adenocarcinoma
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    摘要:

    目的:通过多肽组学分析研究多肽在肺腺癌发生发展中的作用及潜在分子机制。方法:提取3对年龄匹配的男性肺腺癌组织和癌旁组织的内源性多肽,通过液相色谱-串联质谱法(liquid chromatography-tandem mass spectrometry,LC-MS/MS)筛选差异表达的多肽,借助生物信息学推测差异多肽的潜在功能,使用CCK-8实验、划痕实验、Transwell实验验证重点多肽对肺腺癌细胞株(A549、H1975)恶性表型的影响。结果:鉴定了10 kDa以下的多肽4 538条,共筛选出242条在癌组织和癌旁组织间存在差异表达的多肽(差异倍数≥2.0,FDR<0.05),对应202个前体蛋白。GO分析以及KEGG通路富集分析的结果显示这些蛋白与肿瘤发生发展的一系列重要生物学活动密切相关。聚焦于首次发现的多肽LACRP2,体外实验证实该多肽可以一定程度上抑制肺腺癌细胞株的恶性表型。结论:内源性多肽LACRP2可能与肺腺癌部分恶性表型有关。多肽组学可以更全面地帮助了解肺腺癌的发生发展机制。

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    Objective:This study aims to explore the role of peptides in lung adenocarcinoma and its potential molecular mechanisms through peptideomics analysis. Methods:Endogenous peptides from 3 pairs of age-matched male lung adenocarcinoma and paracancerous tissues were extracted and detected by liquid chromatography-tandem mass spectrometry(LC-MS/MS). Bioinformatics was used to infer the potential functions of differential peptides. CCK-8 assays,wound-healing assays,and Transwell assays were carried out to verify the effect of key peptides on the malignant phenotype of lung adenocarcinoma cell lines(A549,H1975). Results:A total of 4 538 peptides were identified,of which 242 were differentially expressed(fold change≥2.0,FDR<0.05),corresponding to 202 precursor proteins. GO analysis and KEGG pathway enrichment analysis showed that these proteins were closely related to a series of important biological activities of tumorigenesis and development. Additionally,the novel peptide LACRP2 was also focused on. It was confirmed that this peptide could inhibit some malignant phenotypes of lung adenocarcinoma cell lines in vitro. Conclusion:The endogenous peptide LACRP2 may be related to some malignant phenotypes of lung adenocarcinoma. Peptidomics can aid in understanding the pathogenesis of lung cancer more comprehensively.

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孙重期,束永前,毛文君.多肽组学分析揭示内源性多肽对肺腺癌恶性表型的关键作用[J].南京医科大学学报(自然科学版),2022,42(3):317-324

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  • 收稿日期:2021-11-29
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  • 在线发布日期: 2022-03-28
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